BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D01LP1|AL427300
(700 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1598 1388 0.0
>3x_Contig1598
Length = 11902
Score = 1388 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Minus
Query: 1 agagcaaaagctcaacgagtttcaaatgataacgtctttccccactgatgaattgcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11770 agagcaaaagctcaacgagtttcaaatgataacgtctttccccactgatgaattgcctaa 11711
Query: 61 tgttataaagcttctacgcaatcattcttggcaattggaacacgctttgggtagatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11710 tgttataaagcttctacgcaatcattcttggcaattggaacacgctttgggtagatattt 11651
Query: 121 cgacgacaattggaaagaaaatctagactttgcaccacagcctacacccgctcaaaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11650 cgacgacaattggaaagaaaatctagactttgcaccacagcctacacccgctcaaaacac 11591
Query: 181 aattcctgtccaacaatcacaatctgatgagcgccagatcctggaagatacgcgttcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11590 aattcctgtccaacaatcacaatctgatgagcgccagatcctggaagatacgcgttcaga 11531
Query: 241 attaccaatatcactgagaatcccaaacattttggagaacccgtttggaatggtacctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11530 attaccaatatcactgagaatcccaaacattttggagaacccgtttggaatggtacctaa 11471
Query: 301 actaccctttattcacagattaccatacaattataaagaaaaattccaaatcatcggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11470 actaccctttattcacagattaccatacaattataaagaaaaattccaaatcatcggatt 11411
Query: 361 aaacggacagccaaatgctactgatgtatactcgcgcaattctgtattacttgccgtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11410 aaacggacagccaaatgctactgatgtatactcgcgcaattctgtattacttgccgtctt 11351
Query: 421 atttttgccgaatttaatagttaggcttagcgtgcatatgttttcatggcttggcattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11350 atttttgccgaatttaatagttaggcttagcgtgcatatgttttcatggcttggcattct 11291
Query: 481 aatctcgtatgcactaggtcagaatatggcaaaatcaaaggcttcatataattgggtaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11290 aatctcgtatgcactaggtcagaatatggcaaaatcaaaggcttcatataattgggtaat 11231
Query: 541 cccgcagaaacctcaggtggacagaaaacctgaagatacatttgcggatataagggaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11230 cccgcagaaacctcaggtggacagaaaacctgaagatacatttgcggatataagggaaac 11171
Query: 601 atgtggtgaaaatgctgaagaacttttgtctttatgctctatgaagagctacaatgaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11170 atgtggtgaaaatgctgaagaacttttgtctttatgctctatgaagagctacaatgaaat 11111
Query: 661 atttgatgaatgcgaatcgaaatacaagtttatgcttttg 700
||||||||||||||||||||||||||||||||||||||||
Sbjct: 11110 atttgatgaatgcgaatcgaaatacaagtttatgcttttg 11071
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5268
Number of Sequences: 1807
Number of extensions: 5268
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 700
length of database: 10,358,551
effective HSP length: 16
effective length of query: 684
effective length of database: 10,329,639
effective search space: 7065473076
effective search space used: 7065473076
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)